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Tommaso Biancalani
Tommaso Biancalani
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Leto
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
H Consortium
Nature 574, 187-192, 2019
397*2019
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Nature methods 18 (11), 1352-1362, 2021
3922021
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
3112021
Resource availability modulates the cooperative and competitive nature of a microbial cross-feeding mutualism
TA Hoek, K Axelrod, T Biancalani, EA Yurtsev, J Liu, J Gore
PLoS biology 14 (8), e1002540, 2016
2612016
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
258*2021
Molecular logic of cellular diversification in the mouse cerebral cortex
DJ Di Bella, E Habibi, RR Stickels, G Scalia, J Brown, P Yadollahpour, ...
Nature 595 (7868), 554-559, 2021
2492021
Stochastic Turing patterns in the Brusselator model
T Biancalani, D Fanelli, F Di Patti
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 81 (4 …, 2010
1792010
Noise-induced bistable states and their mean switching time in foraging colonies
T Biancalani, L Dyson, AJ McKane
Physical review letters 112 (3), 038101, 2014
1542014
Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states
R Chaligne, F Gaiti, D Silverbush, JS Schiffman, HR Weisman, L Kluegel, ...
Nature genetics 53 (10), 1469-1479, 2021
1332021
Stochastic pattern formation and spontaneous polarisation: the linear noise approximation and beyond
AJ McKane, T Biancalani, T Rogers
Bulletin of mathematical biology 76, 895-921, 2014
1022014
Noise-induced mechanism for biological homochirality of early life self-replicators
F Jafarpour, T Biancalani, N Goldenfeld
Physical review letters 115 (15), 158101, 2015
962015
Toward a Common Coordinate Framework for the Human Body
J Rood, T Stuart, S Ghazanfar, T Biancalani, E Fisher, A Butler, ...
Cell 179 (7), 1455-1467, 2019
932019
Escapement mechanisms and the conversion of disequilibria; the engines of creation
E Branscomb, T Biancalani, N Goldenfeld, M Russell
Physics Reports 677, 1-60, 2017
912017
Giant amplification of noise in fluctuation-induced pattern formation
T Biancalani, F Jafarpour, N Goldenfeld
Physical review letters 118 (1), 018101, 2017
702017
Noise-induced symmetry breaking far from equilibrium and the emergence of biological homochirality
F Jafarpour, T Biancalani, N Goldenfeld
Physical Review E 95 (3), 032407, 2017
532017
Stochastic waves in a Brusselator model with nonlocal interaction
T Biancalani, T Galla, AJ McKane
Physical Review E 84 (2), 026201, 2011
532011
Universal biology and the statistical mechanics of early life
N Goldenfeld, T Biancalani, F Jafarpour
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2017
452017
Genetic toggle switch in the absence of cooperative binding: Exact results
T Biancalani, M Assaf
Physical review letters 115 (20), 208101, 2015
422015
The linear noise approximation for reaction-diffusion systems on networks
M Asllani, T Biancalani, D Fanelli, AJ McKane
The European Physical Journal B 86, 1-10, 2013
372013
Stepwise-edited, human melanoma models reveal mutations’ effect on tumor and microenvironment
E Hodis, ET Triglia, JYH Kwon, T Biancalani, LR Zakka, S Parkar, ...
Science 376 (6592), eabi8175, 2022
322022
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