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Vladimir Gligorijevic
Vladimir Gligorijevic
Prescient Design, Genentech, Research & Early Development (gRED)
Verified email at gene.com - Homepage
Title
Cited by
Cited by
Year
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
2352019
Methods for biological data integration: perspectives and challenges
V Gligorijević, N Pržulj
Journal of the Royal Society Interface 12 (112), 20150571, 2015
2302015
Integrative methods for analyzing big data in precision medicine
V Gligorijević, N Malod‐Dognin, N Pržulj
Proteomics 16 (5), 741-758, 2016
1852016
Structure-based protein function prediction using graph convolutional networks
V Gligorijević, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ...
Nature communications 12 (1), 1-14, 2021
1742021
deepNF: deep network fusion for protein function prediction
V Gligorijević, M Barot, R Bonneau
Bioinformatics 34 (22), 3873-3881, 2018
1452018
Non-negative matrix factorizations for multiplex network analysis
V Gligorijević, Y Panagakis, S Zafeiriou
IEEE transactions on pattern analysis and machine intelligence 41 (4), 928-940, 2018
652018
Co-evolutionary mechanisms of emotional bursts in online social dynamics and networks
B Tadić, V Gligorijević, M Mitrović, M Šuvakov
Entropy 15 (12), 5084-5120, 2013
572013
Fuse: multiple network alignment via data fusion
V Gligorijević, N Malod-Dognin, N Pržulj
Bioinformatics 32 (8), 1195-1203, 2016
562016
Patient-specific data fusion for cancer stratification and personalised treatment
V Gligorijević, N Malod-Dognin, N Pržulj
Biocomputing 2016: Proceedings of the Pacific Symposium, 321-332, 2016
452016
Integration of molecular network data reconstructs Gene Ontology
V Gligorijević, V Janjić, N Pržulj
Bioinformatics 30 (17), i594-i600, 2014
412014
How the online social networks are used: dialogues-based structure of MySpace
M Šuvakov, M Mitrović, V Gligorijević, B Tadić
Journal of the Royal Society Interface 10 (79), 20120819, 2013
412013
Structure and stability of online chat networks built on emotion-carrying links
V Gligorijević, M Skowron, B Tadić
Physica A: Statistical Mechanics and its Applications 392 (3), 538-543, 2013
202013
Fusion and community detection in multi-layer graphs
V Gligorijević, Y Panagakis, S Zafeiriou
2016 23rd International Conference on Pattern Recognition (ICPR), 1327-1332, 2016
152016
Directed networks of online chats: Content-based linking and social structure
V Gligorijevic, M Skowron, B Tadic
2012 Eighth International Conference on Signal Image Technology and Internet†…, 2012
132012
Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm
A Sarajlić, V Gligorijević, D Radak, N Pržulj
Integrative Biology 6 (11), 1049-1057, 2014
92014
Protein structural alignments from sequence
JT Morton, CEM Strauss, R Blackwell, D Berenberg, V Gligorijevic, ...
BioRxiv, 2020
82020
Function-guided protein design by deep manifold sampling
V Gligorijevic, D Berenberg, S Ra, A Watkins, S Kelow, K Cho, R Bonneau
bioRxiv, 2021
72021
Building Social Networks of Online Chats with Users, Agents and Bots
V Gligorijevic, M Šuvakov, B Tadic
Complex Networks and their Applicatiobs (SITIS 2012), 251-274, 2013
52013
Computational methods for integration of biological data
V Gligorijević, N Pržulj
Personalized Medicine, 137-178, 2016
42016
The dynamics of emotional chats with Bots: Experiment and agent-based simulations
B Tadic, V Gligorijevic, M Skowron, M Suvakov
arXiv preprint arXiv:1404.4191, 2014
42014
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Articles 1–20