The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ... Nature biotechnology 32 (6), 545-550, 2014 | 332 | 2014 |
Sharing structure and function in biological design with SBOL 2.0 N Roehner, J Beal, K Clancy, B Bartley, G Misirli, R Grunberg, ... ACS synthetic biology 5 (6), 498-506, 2016 | 100 | 2016 |
Synthetic biology open language (SBOL) version 2.0. 0 B Bartley, J Beal, K Clancy, G Misirli, N Roehner, E Oberortner, M Pocock, ... Journal of integrative bioinformatics 12 (2), 902-991, 2015 | 75 | 2015 |
Compliance in service-oriented architectures: A model-driven and view-based approach H Tran, U Zdun, E Oberortner, E Mulo, S Dustdar Information and Software Technology 54 (6), 531-552, 2012 | 69 | 2012 |
Streamlining the design-to-build transition with build-optimization software tools E Oberortner, JF Cheng, NJ Hillson, S Deutsch ACS synthetic biology 6 (3), 485-496, 2017 | 68 | 2017 |
Synthetic biology open language (SBOL) version 2.2. 0 RS Cox III, C Madsen, JA McLaughlin, T Nguyen, N Roehner, B Bartley, ... Journal of integrative bioinformatics 15 (1), 20180001, 2018 | 56 | 2018 |
The synthetic biology open language (SBOL) version 3: simplified data exchange for bioengineering JA McLaughlin, J Beal, G Mısırlı, R Grünberg, BA Bartley, J Scott-Brown, ... Frontiers in Bioengineering and Biotechnology 8, 1009, 2020 | 50 | 2020 |
A standard-enabled workflow for synthetic biology CJ Myers, J Beal, TE Gorochowski, H Kuwahara, C Madsen, ... Biochemical Society Transactions 45 (3), 793-803, 2017 | 45 | 2017 |
Synthetic biology open language (SBOL) version 1.1. 0 M Galdzicki, M Wilson, CA Rodriguez, MR Pocock, E Oberortner, L Adam, ... | 38 | 2012 |
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE) D Waltemath, M Golebiewski, ML Blinov, P Gleeson, H Hermjakob, ... Journal of integrative bioinformatics 17 (2-3), 20200005, 2020 | 36 | 2020 |
libSBOLj 2.0: a java library to support SBOL 2.0 Z Zhang, T Nguyen, N Roehner, G Misirli, M Pocock, E Oberortner, ... IEEE life sciences letters 1 (4), 34-37, 2015 | 33 | 2015 |
Synthetic biology open language (SBOL) version 2.3 C Madsen, A Goñi Moreno, U P, Z Palchick, N Roehner, C Atallah, ... Journal of integrative bioinformatics 16 (2), 20190025, 2019 | 32 | 2019 |
Synthetic biology open language (SBOL) version 3.0. 0 H Baig, P Fontanarrosa, V Kulkarni, JA McLaughlin, P Vaidyanathan, ... Journal of integrative bioinformatics 17 (2-3), 20200017, 2020 | 27 | 2020 |
Proposed data model for the next version of the Synthetic Biology Open Language N Roehner, E Oberortner, M Pocock, J Beal, K Clancy, C Madsen, ... ACS synthetic biology 4 (1), 57-71, 2015 | 26 | 2015 |
Synthetic biology open language (SBOL) version 2.1. 0 J Beal, RS Cox, R Grünberg, J McLaughlin, T Nguyen, B Bartley, M Bissell, ... Journal of integrative bioinformatics 13 (3), 30-132, 2016 | 25 | 2016 |
Tailoring a model-driven quality-of-service DSL for various stakeholders E Oberortner, U Zdun, S Dustdar 2009 ICSE Workshop on Modeling in Software Engineering, 20-25, 2009 | 24 | 2009 |
Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach EK Bowman, M Deaner, JF Cheng, R Evans, E Oberortner, Y Yoshikuni, ... Proceedings of the National Academy of Sciences 117 (31), 18424-18430, 2020 | 23 | 2020 |
Domain-specific languages for service-oriented architectures: An explorative study E Oberortner, U Zdun, S Dustdar European Conference on a Service-Based Internet, 159-170, 2008 | 22 | 2008 |
A rule-based design specification language for synthetic biology E Oberortner, S Bhatia, E Lindgren, D Densmore ACM Journal on Emerging Technologies in Computing Systems (JETC) 11 (3), 1-19, 2014 | 21 | 2014 |
An end-to-end framework for business compliance in process-driven SOAs H Tran, T Holmes, E Oberortner, E Mulo, AB Cavalcante, J Serafinski, ... 2010 12th International Symposium on Symbolic and Numeric Algorithms for …, 2010 | 17 | 2010 |