Blaz Zupan
TitleCited byYear
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
Nature structural & molecular biology 17 (7), 909, 2010
Predictive data mining in clinical medicine: current issues and guidelines
R Bellazzi, B Zupan
International journal of medical informatics 77 (2), 81-97, 2008
Characterizing the RNA targets and position-dependent splicing regulation by TDP-43
JR Tollervey, T Curk, B Rogelj, M Briese, M Cereda, M Kayikci, J König, ...
Nature neuroscience 14 (4), 452, 2011
Orange: data mining toolbox in Python
J Demšar, T Curk, A Erjavec, Č Gorup, T Hočevar, M Milutinovič, ...
The Journal of Machine Learning Research 14 (1), 2349-2353, 2013
Rule evaluation measures: A unifying view
N Lavrač, P Flach, B Zupan
International Conference on Inductive Logic Programming, 174-185, 1999
Orange: From experimental machine learning to interactive data mining
J Demšar, B Zupan, G Leban, T Curk
European conference on principles of data mining and knowledge discovery …, 2004
Spam filtering using statistical data compression models
A Bratko, GV Cormack, B Filipič, TR Lynam, B Zupan
Journal of machine learning research 7 (Dec), 2673-2698, 2006
Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain
B Rogelj, LE Easton, GK Bogu, LW Stanton, G Rot, T Curk, B Zupan, ...
Scientific reports 2, 603, 2012
iCLIP predicts the dual splicing effects of TIA-RNA interactions
Z Wang, M Kayikci, M Briese, K Zarnack, NM Luscombe, G Rot, B Zupan, ...
PLoS biology 8 (10), e1000530, 2010
iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution
J Konig, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
JoVE (Journal of Visualized Experiments), e2638, 2011
Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions
Y Sugimoto, J König, S Hussain, B Zupan, T Curk, M Frye, J Ule
Genome biology 13 (8), R67, 2012
Microarray data mining with visual programming
T Curk, J Demsar, Q Xu, G Leban, U Petrovic, I Bratko, G Shaulsky, ...
Bioinformatics 21 (3), 396-398, 2004
Applications of qualitative multi-attribute decision models in health care
M Bohanec, B Zupan, V Rajkovič
International journal of medical informatics 58, 191-205, 2000
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain
JR Tollervey, Z Wang, T Hortobágyi, JT Witten, K Zarnack, M Kayikci, ...
Genome research 21 (10), 1572-1582, 2011
Nomograms for visualization of naive Bayesian classifier
M Možina, J Demšar, M Kattan, B Zupan
European Conference on Principles of Data Mining and Knowledge Discovery …, 2004
Conserved developmental transcriptomes in evolutionarily divergent species
A Parikh, ER Miranda, M Katoh-Kurasawa, D Fuller, G Rot, L Zagar, ...
Genome biology 11 (3), R35, 2010
Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium
R Benabentos, S Hirose, R Sucgang, T Curk, M Katoh, EA Ostrowski, ...
Current biology 19 (7), 567-572, 2009
Data fusion by matrix factorization
M Žitnik, B Zupan
IEEE transactions on pattern analysis and machine intelligence 37 (1), 41-53, 2014
Epistasis analysis with global transcriptional phenotypes
N Van Driessche, J Demsar, EO Booth, P Hill, P Juvan, B Zupan, A Kuspa, ...
Nature genetics 37 (5), 471, 2005
Learning by discovering concept hierarchies
B Zupan, M Bohanec, J Demšar, I Bratko
Artificial Intelligence 109 (1-2), 211-242, 1999
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