| Genome-wide map of regulatory interactions in the human genome N Heidari, DH Phanstiel, C He, F Grubert, F Jahanbani, M Kasowski, ... Genome research 24 (12), 1905-1917, 2014 | 422 | 2014 |
| Genetic control of chromatin states in humans involves local and distal chromosomal interactions F Grubert, JB Zaugg, M Kasowski, O Ursu, DV Spacek, AR Martin, ... Cell 162 (5), 1051-1065, 2015 | 379 | 2015 |
| A mouse to human search for plasma proteome changes associated with pancreatic tumor development VM Faca, KS Song, H Wang, Q Zhang, AL Krasnoselsky, LF Newcomb, ... PLoS medicine 5 (6), e123, 2008 | 318 | 2008 |
| Proteomic and phosphoproteomic comparison of human ES and iPS cells DH Phanstiel, J Brumbaugh, CD Wenger, S Tian, MD Probasco, DJ Bailey, ... Nature methods 8 (10), 821-827, 2011 | 314 | 2011 |
| Static and dynamic DNA loops form AP-1-bound activation hubs during macrophage development DH Phanstiel, K Van Bortle, D Spacek, GT Hess, MS Shamim, I Machol, ... Molecular cell 67 (6), 1037-1048. e6, 2017 | 285 | 2017 |
| Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging CD Wenger, MV Lee, AS Hebert, GC McAlister, DH Phanstiel, ... Nature methods 8 (11), 933-935, 2011 | 282 | 2011 |
| Phase separation drives aberrant chromatin looping and cancer development JH Ahn, ES Davis, TA Daugird, S Zhao, IY Quiroga, H Uryu, J Li, AJ Storey, ... Nature 595 (7868), 591-595, 2021 | 275 | 2021 |
| Implementation of electron-transfer dissociation on a hybrid linear ion trap− orbitrap mass spectrometer GC McAlister, D Phanstiel, DM Good, WT Berggren, JJ Coon Analytical chemistry 79 (10), 3525-3534, 2007 | 209 | 2007 |
| Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cells D Phanstiel, J Brumbaugh, WT Berggren, K Conard, X Feng, ... Proceedings of the National Academy of Sciences 105 (11), 4093-4098, 2008 | 205 | 2008 |
| Sushi. R: flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures DH Phanstiel, AP Boyle, CL Araya, MP Snyder Bioinformatics 30 (19), 2808-2810, 2014 | 192 | 2014 |
| COMPASS: A suite of pre‐and post‐search proteomics software tools for OMSSA CD Wenger, DH Phanstiel, MV Lee, DJ Bailey, JJ Coon Proteomics 11 (6), 1064-1074, 2011 | 188 | 2011 |
| Contribution of protein fractionation to depth of analysis of the serum and plasma proteomes V Faca, SJ Pitteri, L Newcomb, V Glukhova, D Phanstiel, A Krasnoselsky, ... Journal of proteome research 6 (9), 3558-3565, 2007 | 175 | 2007 |
| Whole-exome sequencing identifies tetratricopeptide repeat domain 7A (TTC7A) mutations for combined immunodeficiency with intestinal atresias R Chen, S Giliani, G Lanzi, GI Mias, S Lonardi, K Dobbs, J Manis, H Im, ... Journal of allergy and clinical immunology 132 (3), 656-664. e17, 2013 | 165 | 2013 |
| A proteomics grade electron transfer dissociation-enabled hybrid linear ion trap-orbitrap mass spectrometer GC McAlister, WT Berggren, J Griep-Raming, S Horning, A Makarov, ... Journal of proteome research 7 (8), 3127-3136, 2008 | 163 | 2008 |
| Coral: clear and customizable visualization of human kinome data KS Metz, EM Deoudes, ME Berginski, I Jimenez-Ruiz, BA Aksoy, ... Cell systems 7 (3), 347-350. e1, 2018 | 144 | 2018 |
| Mango: a bias-correcting ChIA-PET analysis pipeline DH Phanstiel, AP Boyle, N Heidari, MP Snyder Bioinformatics 31 (19), 3092-3098, 2015 | 137 | 2015 |
| Quantitative analysis of acrylamide labeled serum proteins by LC− MS/MS V Faca, M Coram, D Phanstiel, V Glukhova, Q Zhang, M Fitzgibbon, ... Journal of proteome research 5 (8), 2009-2018, 2006 | 132 | 2006 |
| Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements J Tycko, M Wainberg, GK Marinov, O Ursu, GT Hess, BK Ego, Aradhana, ... Nature communications 10 (1), 4063, 2019 | 116 | 2019 |
| Identification of 14-3-3𝛉 as an Antigen that Induces a Humoral Response in Lung Cancer SR Pereira-Faca, R Kuick, E Puravs, Q Zhang, AL Krasnoselsky, ... Cancer Research 67 (24), 12000-12006, 2007 | 108 | 2007 |
| Peptide quantification using 8-plex isobaric tags and electron transfer dissociation tandem mass spectrometry D Phanstiel, R Unwin, GC McAlister, JJ Coon Analytical chemistry 81 (4), 1693-1698, 2009 | 78 | 2009 |
David M. GoodCovance Laboratories, Inc.Verified email at covance.com
