The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ... Genome biology 20, 1-23, 2019 | 402 | 2019 |
deepNF: deep network fusion for protein function prediction V Gligorijević, M Barot, R Bonneau Bioinformatics 34 (22), 3873-3881, 2018 | 219 | 2018 |
NetQuilt: deep multispecies network-based protein function prediction using homology-informed network similarity M Barot, V Gligorijevic, K Cho, R Bonneau Bioinformatics, 2021 | 19 | 2021 |
Learning sequence, structure, and function representations of proteins with language models T Hamamsy, M Barot, JT Morton, M Steinegger, R Bonneau, K Cho bioRxiv, 2023 | 8 | 2023 |
Deep Learning for Protein Function Prediction and Novel Class Discovery M Barot New York University, 2023 | | 2023 |
Automated Protein Function Description for Novel Class Discovery M Barot, V Gligorijevic, R Bonneau, K Cho bioRxiv, 2022.10. 13.512154, 2022 | | 2022 |
MOESM2 of The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, T Bergquist, A Lee, B Kacsoh, A Crocker, K Lewis, ... (No Title), 2019 | | 2019 |
Meta-Neural Cellular Automata M Barot | | |