Shannon Straub
Shannon Straub
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Navigating the tip of the genomic iceberg: Next‐generation sequencing for plant systematics
SCK Straub, M Parks, K Weitemier, M Fishbein, RC Cronn, A Liston
American journal of botany 99 (2), 349-364, 2012
Hyb‐Seq: Combining target enrichment and genome skimming for plant phylogenomics
K Weitemier, SCK Straub, RC Cronn, M Fishbein, R Schmickl, ...
Applications in plant sciences 2 (9), 1400042, 2014
Phylogeny and evolution of grammitid ferns (Grammitidaceae): a case of rampant morphological homoplasy
TA Ranker, AR Smith, BS Parris, JMO Geiger, CH Haufler, SCK Straub, ...
Taxon 53 (2), 415-428, 2004
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing
SCK Straub, M Fishbein, T Livshultz, Z Foster, M Parks, K Weitemier, ...
BMC genomics 12, 1-22, 2011
Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP
DV Dugas, D Hernandez, EJM Koenen, E Schwarz, S Straub, CE Hughes, ...
Scientific reports 5, 16958, 2015
Horizontal transfer of DNA from the mitochondrial to the plastid genome and its subsequent evolution in milkweeds (Apocynaceae)
SCK Straub, RC Cronn, C Edwards, M Fishbein, A Liston
Genome biology and evolution 5 (10), 1872-1885, 2013
Repeated translocation of a gene cassette drives sex-chromosome turnover in strawberries
JA Tennessen, N Wei, SCK Straub, R Govindarajulu, A Liston, TL Ashman
PLoS biology 16 (8), e2006062, 2018
Draft genome sequence of Mentha longifolia and development of resources for mint cultivar improvement
KJ Vining, SR Johnson, A Ahkami, I Lange, AN Parrish, SC Trapp, ...
Molecular plant 10 (2), 323-339, 2017
Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)
R Schmickl, A Liston, V Zeisek, K Oberlander, K Weitemier, SCK Straub, ...
Molecular Ecology Resources 16 (5), 1124–1135, 2016
Evolution on the backbone: Apocynaceae phylogenomics and new perspectives on growth forms, flowers, and fruits
M Fishbein, T Livshultz, SCK Straub, AO Simões, J Boutte, A McDonnell, ...
American Journal of Botany 105 (3), 495-513, 2018
Phylogenetic signal detection from an ancient rapid radiation: Effects of noise reduction, long-branch attraction, and model selection in crown clade Apocynaceae
SCK Straub, MJ Moore, PS Soltis, DE Soltis, A Liston, T Livshultz
Molecular Phylogenetics and Evolution 80, 169-185, 2014
Molecular phylogenetics and evolution of the endemic Hawaiian genus Adenophorus (Grammitidaceae)
TA Ranker, JMO Geiger, SC Kennedy, AR Smith, CH Haufler, BS Parris
Molecular phylogenetics and evolution 26 (3), 337-347, 2003
Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA in Asclepias (Apocynaceae)
K Weitemier, SCK Straub, M Fishbein, A Liston
PeerJ 3, e718, 2015
PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing
L Kovar, M Nageswara-Rao, S Ortega-Rodriguez, DV Dugas, S Straub, ...
Genome biology and evolution 10 (9), 2501-2517, 2018
Testing the polyploid past of soybean using a low-copy nuclear gene - Is Glycine (Fabaceae: Papilionoideae) an auto-or allopolyploid?
SCK Straub, BE Pfeil, JJ Doyle
Molecular phylogenetics and evolution 39 (2), 580-584, 2006
Settling a family feud: A high‐level phylogenomic framework for the Gentianales based on 353 nuclear genes and partial plastomes
A Antonelli, JJ Clarkson, K Kainulainen, O Maurin, GE Brewer, AP Davis, ...
American Journal of Botany 108 (7), 1143-1165, 2021
Evolution at the tips: Asclepias phylogenomics and new perspectives on leaf surfaces
M Fishbein, SCK Straub, J Boutte, K Hansen, RC Cronn, A Liston
American Journal of Botany 105 (3), 514-524, 2018
Testing a hypothesis of intergeneric allopolyploidy in vine cacti (Cactaceae: Hylocereeae)
O Plume, SCK Straub, N Tel-Zur, A Cisneros, B Schneider, JJ Doyle
Systematic Botany 38 (3), 737-751, 2013
Evolution of pyrrolizidine alkaloid biosynthesis in Apocynaceae: revisiting the defence de‐escalation hypothesis
T Livshultz, E Kaltenegger, SCK Straub, K Weitemier, E Hirsch, K Koval, ...
New Phytologist 218 (2), 762-773, 2018
A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae.
K Weitemier, SCK Straub, M Fishbein, CD Bailey, RC Cronn, A Liston
PeerJ 7, e7649, 2019
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