| Variation graph toolkit improves read mapping by representing genetic variation in the reference E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ... Nature biotechnology 36 (9), 875-879, 2018 | 533 | 2018 |
| ReactomeFIViz: the Reactome FI Cytoscape app for pathway and network-based data analysis Guanming Wu, Eric Dawson, Adrian Duong, Robin Haw, Lincoln Stein F1000Research 3, 2014 | 239 | 2014 |
| Genotyping structural variants in pangenome graphs using the vg toolkit G Hickey, D Heller, J Monlong, JA Sibbesen, J Sirén, J Eizenga, ... Genome biology 21, 1-17, 2020 | 178 | 2020 |
| A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins PLoS computational biology 18 (5), e1009123, 2022 | 132 | 2022 |
| Radiation-related genomic profile of papillary thyroid carcinoma after the Chernobyl accident LM Morton, DM Karyadi, C Stewart, TI Bogdanova, ET Dawson, ... Science 372 (6543), eabg2538, 2021 | 111 | 2021 |
| Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ... Journal of molecular evolution 79, 130-142, 2014 | 51 | 2014 |
| Accelerating Minimap2 for accurate long read alignment on GPUs H Sadasivan, M Maric, E Dawson, V Iyer, J Israeli, S Narayanasamy Journal of biotechnology and biomedicine 6 (1), 13, 2023 | 44 | 2023 |
| Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin AG Meyer, ET Dawson, CO Wilke Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013 | 37 | 2013 |
| Sequence variation aware genome references and read mapping with the variation graph toolkit E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ... BioRxiv, 234856, 2017 | 30 | 2017 |
| Limited utility of residue masking for positive-selection inference SJ Spielman, ET Dawson, CO Wilke Molecular biology and evolution 31 (9), 2496-2500, 2014 | 14 | 2014 |
| A crowdsourced set of curated structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... PLoS computational biology 16 (6), e1007933, 2020 | 7 | 2020 |
| An international virtual hackathon to build tools for the analysis of structural variants within species ranging from coronaviruses to vertebrates AM Mc Cartney, M Mahmoud, M Jochum, DP Agustinho, B Zorman, ... F1000Research 10, 2021 | 5 | 2021 |
| GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats ET Dawson, R Durbin Journal of open source software 4 (33), 2019 | 5 | 2019 |
| ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis. F1000Res. 2014; 3: 146 G Wu, E Dawson, A Duong, R Haw, L Stein | 5 | |
| SVCurator: a crowdsourcing app to visualize evidence of structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... BioRxiv, 581264, 2019 | 4 | 2019 |
| Viral coinfection analysis using a MinHash toolkit ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ... BMC bioinformatics 20, 1-10, 2019 | 3 | 2019 |
| Abstract PO-055: Molecular characterization of papillary thyroid cancer in relation to ionizing radiation dose following the Chernobyl accident LM Morton, D Karyadi, C Stewart, T Bogdanova, E Dawson, M Steinberg, ... Clinical Cancer Research 27 (8_Supplement), PO-055-PO-055, 2021 | 1 | 2021 |
| rkmh: a MinHash toolbox for analyzing HPV coinfections ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ... Cancer Research 78 (13_Supplement), 3273-3273, 2018 | 1 | 2018 |
| Molecular characterization of papillary thyroid cancer in relation to ionizing radiation dose following the Chernobyl accident. LM Morton, D Karyadi, C Stewart, T Bogdanova, E Dawson, M Steinberg, ... CLINICAL CANCER RESEARCH 27 (8), 2021 | | 2021 |
| Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine M Mahmoud, AR Gener, MM Khayat, AC English, A Balaji, A Zhou, ... F1000Research 9 (1141), 1141, 2020 | | 2020 |
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Preverjeni e-poštni naslov na oicr.on.ca
