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Nicholas Luscombe
Nicholas Luscombe
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Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
122722012
A census of human transcription factors: function, expression and evolution
JM Vaquerizas, SK Kummerfeld, SA Teichmann, NM Luscombe
Nature Reviews Genetics 10 (4), 252-263, 2009
17342009
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biology 9 (4), e1001046, 2011
13662011
DNA-binding specificities of human transcription factors
A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ...
Cell 152 (1-2), 327-339, 2013
11752013
Genomic analysis of regulatory network dynamics reveals large topological changes
NM Luscombe, M Madan Babu, H Yu, M Snyder, SA Teichmann, ...
Nature 431 (7006), 308-312, 2004
11642004
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
Nature structural & molecular biology 17 (7), 909-915, 2010
10832010
Amino acid–base interactions: a three-dimensional analysis of protein–DNA interactions at an atomic level
NM Luscombe, RA Laskowski, JM Thornton
Nucleic acids research 29 (13), 2860-2874, 2001
10652001
Structure and evolution of transcriptional regulatory networks
MM Babu, NM Luscombe, L Aravind, M Gerstein, SA Teichmann
Current opinion in structural biology 14 (3), 283-291, 2004
9942004
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ...
Nature genetics 47 (6), 598-606, 2015
8842015
An overview of the structures of protein-DNA complexes
NM Luscombe, SE Austin, HM Berman, JM Thornton
Genome biology 1 (1), 1-37, 2000
8002000
What is bioinformatics? A proposed definition and overview of the field
NM Luscombe, D Greenbaum, M Gerstein
Methods of information in medicine 40 (4), 346-358, 2001
7452001
Annotation transfer between genomes: protein–protein interologs and protein–DNA regulogs
H Yu, NM Luscombe, HX Lu, X Zhu, Y Xia, JDJ Han, N Bertin, S Chung, ...
Genome research 14 (6), 1107-1118, 2004
6712004
Protein clefts in molecular recognition and function.
RA Laskowski, NM Luscombe, MB Swindells, JM Thornton
Protein science: a publication of the Protein Society 5 (12), 2438, 1996
5791996
Protein–RNA interactions: a structural analysis
S Jones, DTA Daley, NM Luscombe, HM Berman, JM Thornton
Nucleic acids research 29 (4), 943-954, 2001
5112001
Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities
A Jolma, T Kivioja, J Toivonen, L Cheng, G Wei, M Enge, M Taipale, ...
Genome research 20 (6), 861-873, 2010
4652010
Protein–RNA interactions: new genomic technologies and perspectives
J König, K Zarnack, NM Luscombe, J Ule
Nature Reviews Genetics 13 (2), 77-83, 2012
4342012
Deterministic evolutionary trajectories influence primary tumor growth: TRACERx renal
S Turajlic, H Xu, K Litchfield, A Rowan, S Horswell, T Chambers, ...
Cell 173 (3), 595-610. e11, 2018
4202018
Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of Alu Elements
K Zarnack, J König, M Tajnik, I Martincorena, S Eustermann, I Stévant, ...
Cell 152 (3), 453-466, 2013
4162013
Distribution of NF-κB-binding sites across human chromosome 22
R Martone, G Euskirchen, P Bertone, S Hartman, TE Royce, ...
Proceedings of the National Academy of Sciences 100 (21), 12247-12252, 2003
4092003
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements
S Schoenfelder, M Furlan-Magaril, B Mifsud, F Tavares-Cadete, R Sugar, ...
Genome research 25 (4), 582-597, 2015
4062015
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