Mika Hirakawa
Mika Hirakawa
JT Biohistory Research Hall
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KEGG for linking genomes to life and the environment
M Kanehisa, M Araki, S Goto, M Hattori, M Hirakawa, M Itoh, T Katayama, ...
Nucleic acids research 36 (suppl_1), D480-D484, 2007
From genomics to chemical genomics: new developments in KEGG
M Kanehisa, S Goto, M Hattori, KF Aoki-Kinoshita, M Itoh, S Kawashima, ...
Nucleic acids research 34 (suppl_1), D354-D357, 2006
KEGG for representation and analysis of molecular networks involving diseases and drugs
M Kanehisa, S Goto, M Furumichi, M Tanabe, M Hirakawa
Nucleic acids research 38 (suppl_1), D355-D360, 2010
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ...
PLoS biology 2 (6), e162, 2004
JSNP: a database of common gene variations in the Japanese population
M Hirakawa, T Tanaka, Y Hashimoto, M Kuroda, T Takagi, Y Nakamura
Nucleic acids research 30 (1), 158-162, 2002
Possible involvement of SINEs in mammalian-specific brain formation
T Sasaki, H Nishihara, M Hirakawa, K Fujimura, M Tanaka, N Kokubo, ...
Proceedings of the National Academy of Sciences 105 (11), 4220-4225, 2008
The KEGG databases and tools facilitating omics analysis: latest developments involving human diseases and pharmaceuticals
M Kotera, M Hirakawa, T Tokimatsu, S Goto, M Kanehisa
Next Generation Microarray Bioinformatics: Methods and Protocols, 19-39, 2012
A mammalian conserved element derived from SINE displays enhancer properties recapitulating Satb2 expression in early-born callosal projection neurons
K Tashiro, A Teissier, N Kobayashi, A Nakanishi, T Sasaki, K Yan, ...
PloS one 6 (12), e28497, 2011
Coordinately Co-opted Multiple Transposable Elements Constitute an Enhancer for wnt5a Expression in the Mammalian Secondary Palate
H Nishihara, N Kobayashi, C Kimura-Yoshida, K Yan, O Bormuth, Q Ding, ...
PLoS genetics 12 (10), e1006380, 2016
A SINE-Derived Element Constitutes a Unique Modular Enhancer for Mammalian Diencephalic Fgf8
A Nakanishi, N Kobayashi, A Suzuki-Hirano, H Nishihara, T Sasaki, ...
Public Library of Science 7 (8), e43785, 2012
Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes
M Hirakawa, H Nishihara, M Kanehisa, N Okada
Gene 441 (1-2), 100-110, 2009
HOWDY: an integrated database system for human genome research
M Hirakawa
Nucleic acids research 30 (1), 152-157, 2002
Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis
A Harata, M Hirakawa, T Sakuma, T Yamamoto, C Hashimoto
Development, Growth & Differentiation 61 (2), 186-197, 2019
ALIS Sequencing Database for large scale human genome project
M Hirakawa, K Imai, H Yamaguchi, J Shimada, K Takehana, I Suzuki, ...
Genome Informatics 8, 278-279, 1997
Mechanism of genome diversification by amplification of SINEs with the CTCF binding site
T Tsukui, K Kurokawa, H Nishihara, M Hirakawa, N Okada
GENES & GENETIC SYSTEMS 90 (6), 407-407, 2015
GDB (Genome Data Base)
M Hirakawa, M Suzuki, S Suwa, S Miyazawa, N Shimizu
Journal of Information Processing and Management 36 (11), 1023-1032, 2008
How life is interpreted into information
M Hirakawa
Journal of Information Processing and Management 41 (4), 254-264, 2001
Beyond the human genome sequencing
M Hirakawa, K Matsumura, M Kuroda
Journal of Information Processing and Management 44 (5), 342, 2001
HOWDY: The Integrated Human Genome Database of ALIS
K Matsumura, M Hirakawa, K Takehana, H Yamaguchi, S Sato, M Kuroda
Genome Informatics 11, 382-383, 2000
WEB Based GENOME Analysis Tools in ALIS Project
K Takehana, T Ito, T Yada, M Hirakawa, H Yamaguchi, J Shimada, ...
Genome Informatics 10, 310-311, 1999
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