Shahin Mohammadi

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Soavtorji

Manolis KellisProfessor of Computer Science, MIT and Broad InstitutePreverjeni e-poštni naslov na mit.edu
Jose Davila-VelderrainHuman TechnopolePreverjeni e-poštni naslov na fht.org
Hansruedi MathysUniversity of PittsburghPreverjeni e-poštni naslov na pitt.edu
David GleichPurdue UniversityPreverjeni e-poštni naslov na purdue.edu
Giorgos KolliasIBM T.J. Watson Research CenterPreverjeni e-poštni naslov na us.ibm.com
Abbas Nowzari-Daliniassociate prof., university of tehranPreverjeni e-poštni naslov na ut.ac.ir
Shankar SubramaniamUniversity of California San DiegoPreverjeni e-poštni naslov na ucsd.edu
Hyeseung LeePicower Institute for Learning and Memory, Massachusetts Institute of TechnologyPreverjeni e-poštni naslov na mit.edu
Robbie FensterMcLean HospitalPreverjeni e-poštni naslov na partners.org
Sahar AsadiDirector of AI Labs at King (part of Microsoft)Preverjeni e-poštni naslov na king.com
Ali Masoudi-Nejad, ProfessorLaboratory of Systems Biology and Bioinformatics (LBB), University of TehranPreverjeni e-poštni naslov na ut.ac.ir
Falk SchreiberProfessor, University of Konstanz and Monash UniversityPreverjeni e-poštni naslov na uni-konstanz.de
elahe elahiUniversity of TehranPreverjeni e-poštni naslov na ut.ac.ir
J. Christopher LoveProfessor of Chemical Engineering, MITPreverjeni e-poštni naslov na mit.edu
Brittany A GoodsAssistant Professor @ Dartmouth CollegePreverjeni e-poštni naslov na dartmouth.edu
Alex K. ShalekMIT, Ragon Institute, Broad InstitutePreverjeni e-poštni naslov na mit.edu
Vikram RavindraUniversity of CincinnatiPreverjeni e-poštni naslov na ucmail.uc.edu
Francisco J GarciaMassachusetts Institute of TechnologyPreverjeni e-poštni naslov na mit.edu
Huda NassarPostdoc, Stanford UniversityPreverjeni e-poštni naslov na stanford.edu
Tamara G. KoldaMathSci.ai (independent consulting)Preverjeni e-poštni naslov na mathsci.ai

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Shahin Mohammadi

Broad Institute

Preverjeni e-poštni naslov na broadinstitute.org - Domača stran

Computational biology


Naslov Razvrsti po navedbah Razvrsti po letniku Razvrsti po naslovu	Navedeno Navedeno	Leto
Single-cell transcriptomic analysis of Alzheimer’s disease H Mathys, J Davila-Velderrain, Z Peng, F Gao, S Mohammadi, JZ Young, ... Nature 570 (7761), 332-337, 2019	1869	2019
Kavosh: a new algorithm for finding network motifs ZRM Kashani, H Ahrabian, E Elahi, A Nowzari-Dalini, ES Ansari, S Asadi, ... BMC bioinformatics 10, 1-12, 2009	292	2009
Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration M Menon, S Mohammadi, J Davila-Velderrain, BA Goods, TD Cadwell, ... Nature communications 10 (1), 4902, 2019	240	2019
Cell type-specific transcriptomics reveals that mutant huntingtin leads to mitochondrial RNA release and neuronal innate immune activation H Lee, RJ Fenster, SS Pineda, WS Gibbs, S Mohammadi, ... Neuron 107 (5), 891-908. e8, 2020	176	2020
Network similarity decomposition (nsd): A fast and scalable approach to network alignment G Kollias, S Mohammadi, A Grama IEEE Transactions on Knowledge and Data Engineering 24 (12), 2232-2243, 2011	110	2011
Scope and limitations of yeast as a model organism for studying human tissue-specific pathways S Mohammadi, B Saberidokht, S Subramaniam, A Grama BMC systems biology 9, 1-22, 2015	95	2015
A Critical Survey of Deconvolution Methods for Separating Cell-Types in Complex Tissues S Mohammadi, N Zuckerman, A Goldsmith, A Grama Proceedings of IEEE, Special Issue on Principles and Applications of Science …, 2016	81	2016
Reconstruction of cell-type-specific interactomes at single-cell resolution S Mohammadi, J Davila-Velderrain, M Kellis Cell systems 9 (6), 559-568. e4, 2019	63	2019
Single-cell dissection of schizophrenia reveals neurodevelopmental-synaptic link and transcriptional resilience associated cellular state B Ruzicka, S Mohammadi, J Davila-Velderrain, S Subburaju, R Tso, ... Biological psychiatry 89 (9), S106, 2021	59	2021
Low rank spectral network alignment H Nassar, N Veldt, S Mohammadi, A Grama, DF Gleich Proceedings of the 2018 World Wide Web Conference, 619-628, 2018	56	2018
A geometric approach to characterize the functional identity of single cells S Mohammadi, V Ravindra, DF Gleich, A Grama Nature communications 9 (1), 1516, 2018	54	2018
Triangular Alignment (TAME): A Tensor-based Approach for Higher-order Network Alignment S Mohammadi, DF Gleich, TG Kolda, A Grama IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1-1, 2016	54	2016
A multiresolution framework to characterize single-cell state landscapes S Mohammadi, J Davila-Velderrain, M Kellis Nature communications 11 (1), 5399, 2020	46	2020
Author Correction: Single-cell transcriptomic analysis of Alzheimer’s disease H Mathys, J Davila-Velderrain, Z Peng, F Gao, S Mohammadi, JZ Young, ... Nature 571 (7763), E1-E1, 2019	32	2019
Single-cell profiling of the human primary motor cortex in ALS and FTLD SS Pineda, H Lee, BE Fitzwalter, S Mohammadi, LJ Pregent, ... biorxiv, 2021.07. 07.451374, 2021	29	2021
A fast approach to global alignment of protein-protein interaction networks G Kollias, M Sathe, S Mohammadi, A Grama BMC research notes 6, 1-11, 2013	29	2013
Context-specific recommendation system for predicting similar pubmed articles S Mohammadi, S Kylasa, G Kollias, A Grama 2016 IEEE 16th International Conference on Data Mining Workshops (ICDMW …, 2016	19	2016
Single-cell multi-cohort dissection of the schizophrenia transcriptome WB Ruzicka, S Mohammadi, JF Fullard, J Davila-Velderrain, S Subburaju, ... Science 384 (6698), eadg5136, 2024	17	2024
Single-cell anatomical analysis of human hippocampus and entorhinal cortex uncovers early-stage molecular pathology in Alzheimer’s disease J Davila-Velderrain, H Mathys, S Mohammadi, B Ruzicka, X Jiang, A Ng, ... bioRxiv, 2021.07. 01.450715, 2021	15	2021
Single-cell deconvolution of 3,000 post-mortem brain samples for eQTL and GWAS dissection in mental disorders Y Park, L He, J Davila-Velderrain, L Hou, S Mohammadi, H Mathys, ... BioRxiv, 2021.01. 21.426000, 2021	14	2021

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