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Shashi Pandit
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Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score
SB Pandit, J Skolnick
BMC bioinformatics 9, 1-11, 2008
1622008
XTMS: pathway design in an eXTended metabolic space
P Carbonell, P Parutto, J Herisson, SB Pandit, JL Faulon
Nucleic acids research 42 (W1), W389-W394, 2014
1212014
Proteomics analysis of carbon-starved Mycobacterium smegmatis: induction of Dps-like protein
S Gupta, SB Pandit, N Srinivasan, D Chatterji
Protein engineering 15 (6), 503-511, 2002
882002
Enumerating metabolic pathways for the production of heterologous target chemicals in chassis organisms
P Carbonell, D Fichera, SB Pandit, JL Faulon
BMC systems biology 6, 1-18, 2012
872012
Analysis of TASSER‐based CASP7 protein structure prediction results
H Zhou, SB Pandit, SY Lee, J Borreguero, H Chen, L Wroblewska, ...
Proteins: Structure, Function, and Bioinformatics 69 (S8), 90-97, 2007
832007
Phosphoprotein and phosphopeptide interactions with the FHA domain from Arabidopsis kinase-associated protein phosphatase
Z Ding, H Wang, X Liang, ER Morris, F Gallazzi, S Pandit, J Skolnick, ...
Biochemistry 46 (10), 2684-2696, 2007
652007
SUPFAM—a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and …
SB Pandit, D Gosar, S Abhiman, S Sujatha, SS Dixit, NS Mhatre, ...
Nucleic acids research 30 (1), 289-293, 2002
622002
SUPFAM: a database of sequence superfamilies of protein domains
SB Pandit, R Bhadra, VS Gowri, S Balaji, B Anand, N Srinivasan
BMC bioinformatics 5, 1-5, 2004
582004
TASSER-Lite: an automated tool for protein comparative modeling
SB Pandit, Y Zhang, J Skolnick
Biophysical Journal 91 (11), 4180-4190, 2006
532006
Integration of related sequences with protein three-dimensional structural families in an updated version of PALI database
VS Gowri, SB Pandit, PS Karthik, N Srinivasan, S Balaji
Nucleic acids research 31 (1), 486-488, 2003
532003
Performance of the Pro‐sp3‐TASSER server in CASP8
H Zhou, SB Pandit, J Skolnick
Proteins: Structure, Function, and Bioinformatics 77 (S9), 123-127, 2009
492009
Survey for g‐proteins in the prokaryotic genomes: prediction of functional roles based on classification
SB Pandit, N Srinivasan
Proteins: Structure, Function, and Bioinformatics 52 (4), 585-597, 2003
372003
PSiFR: an integrated resource for prediction of protein structure and function
SB Pandit, M Brylinski, H Zhou, M Gao, AK Arakaki, J Skolnick
Bioinformatics 26 (5), 687-688, 2010
202010
PRODOC: a resource for the comparison of tethered protein domain architectures with in-built information on remotely related domain families
O Krishnadev, N Rekha, SB Pandit, S Abhiman, S Mohanty, LS Swapna, ...
Nucleic acids research 33 (suppl_2), W126-W129, 2005
142005
Disulphide bond restrains the C-terminal region of thermostable direct hemolysin during folding to promote oligomerization
N Kundu, S Tichkule, SB Pandit, K Chattopadhyay
Biochemical Journal 474 (2), 317-331, 2017
112017
Enhanced functional and structural domain assignments using remote similarity detection procedures for proteins encoded in the genome of Mycobacterium tuberculosis H37Rv (vol …
S Namboori, N Mhatre, S Sujatha, N Srinivasan, SB Pandit
JOURNAL OF BIOSCIENCES 29 (4), 445-445, 2004
112004
An inquiry‐based approach in large undergraduate LABS: learning, by doing it the “wrong” way
AK Bachhawat, SB Pandit, I Banerjee, S Anand, R Sarkar, A Mrigwani, ...
Biochemistry and Molecular Biology Education 48 (3), 227-235, 2020
102020
Standard operating procedure for audio visual recording of informed consent: An initiative to facilitate regulatory compliance
PM Parikh, K Prabhash, KB Govind, R Digumarti, S Pandit, I Banerjee, ...
Indian Journal of Cancer 51 (2), 113-116, 2014
92014
Structural and functional characterization of gene products encoded in the human genome by homology detection
SB Pandit, S Balaji, N Srinivasan
IUBMB life 56 (6), 317-331, 2004
92004
CSmetaPred: a consensus method for prediction of catalytic residues
P Choudhary, S Kumar, AK Bachhawat, SB Pandit
BMC bioinformatics 18, 1-13, 2017
82017
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Articles 1–20